PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gorai.008G183300.1
Common NameB456_008G183300, LOC105764537
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family ERF
Protein Properties Length: 339aa    MW: 37034.2 Da    PI: 4.6269
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gorai.008G183300.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.4e-18123171254
                 AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                         +  GVr++k +g+W+AeIr+p +   ++r++lg+++t eeAaka++a ++++e
  Gorai.008G183300.1 123 KPVGVRQRK-WGKWAAEIRHPLK---KTRIWLGTYDTLEEAAKAYEAKKLEFE 171
                         789*****9.**********743...5********************999987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.01E-21122170No hitNo description
PfamPF008471.9E-12123172IPR001471AP2/ERF domain
PROSITE profilePS5103218.386123182IPR001471AP2/ERF domain
SMARTSM003801.5E-15123177IPR001471AP2/ERF domain
PRINTSPR003671.1E-7124135IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-16125170IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.4E-21126170IPR001471AP2/ERF domain
PRINTSPR003671.1E-7146162IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MLEHRKQTMN LSKSCKKPKK PQSTMSEEET QMTRKVRVIF HDPYATDSSS SEDESEGSAA  60
RKAPRGRRFV REMRVPVLGL APQVKPLESE TSSQDSNSKT PTSRKRVLSR TLEDKPLVAK  120
TKKPVGVRQR KWGKWAAEIR HPLKKTRIWL GTYDTLEEAA KAYEAKKLEF EALTVAAAAS  180
ASSDKTNDLS CSAAASHNNT VPSASEESES LVSHTSPSSV HELDTSASVS VSNNNDDCGD  240
ANKEVFDANF ADIPIPDLCF IDDPLLSGSV GQELNIDAEA ADYLFVNDFG MMLEDYCSIE  300
DLSICGIGAD EPSDLPDCDF STDDFVFDEV APLNIACP*